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The identification of individual blue whales is still done manually by comparing new photographs with a catalog of known individuals.
flaA types were assigned manually by comparing band positions.
Currently, most researchers identify Helitrons manually by comparing sequences.
The genotyping was performed manually by comparing the banding patterns on the agarose gels.
The positions of circles were determined manually by comparing the fundus photographs and the LSFG color map images.
Consensus ITS-2 sequences, here called genotypes, were constructed manually by comparing alignments obtained using the Clustal W (version 1.83) algorithm [ 21].
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Gene predictions were manually checked by comparing the sequences with homologous gene/proteins in the GenBank database.
All candidates were manually inspected by comparing the poly(A)+ and poly(A -/ribo- RNA-seq datasets.
Spots on the fusion image were automatically detected and manually validated by comparing the original blot images with the fusion image.
Gene predictions were performed using the FGENESH program (Softberry) and manually checked by comparing with homologous gene/proteins in the GenBank database.
Variable domain sequences were translated into peptide sequences using a self-written Perl script, and manually confirmed by comparing with the literature [ 4].
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