Sentence examples for manually built in from inspiring English sources

The atomic model of the intracellular domain was manually built in coot (Emsley et al., 2010) based on the start model with the Mutate and Renumber tools.

This reference list was manually built in the context of TEXTCC research project, conducted by Maria José Finatto group at the Federal University of Rio Grande do Sul (UFRGS).

The structure was manually built in Coot [ 50] and refined with Refmac5 [ 51].

The complete model was manually built in COOT and refined in refmac.

The structure was manually built in COOT (Emsley et al., 2010) and refined in REFMAC 5.8.0073 (Murshudov et al., 2011) with intensity based twin refinement.

The missing segments flanking the LOV core were manually built in Coot (Emsley et al., 2010) and the structure refined in cycles of phenix.refine (Afonine et al., 2012) refinement and manual re-building.

The KEGG pathways, not just cancer pathways, are constructed and curated by research staff at the Kyoto University, who read literature and manually build-in the connections.

Clamp binding motifs of PolIIIα and exonuclease were manually built into the clamp in Coot guided by the crystal structures of clamp-bound peptides from Pol II and Pol IV, (Bunting et al., 2003; Georgescu et al., 2008b; Jeruzalmi et al., 2001).

A model was manually built into the modified experimental electron density using COOT (Emsley and Cowtan, 2004) and further refined in PHENIX.

These measures compare the computed summaries with those manually built by users.

Subsequently the models were manually built by using COOT [28], followed by refinement using CNS [29].