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By manual comparison with NCBI Blast, excepting methylation at CpG sites, we found an amount of cytosine methylation at non-CpG sites within the HIF-1α gene promoter.
Traditional practice includes manual comparison of each biochemical property of the unknown sample with known reference samples and inference of its identity based on the maximum similarity pattern with the known samples.
In case of doubt, the human operator can also access previously stored images for a manual comparison.
The assigned quality labels will be further reviewed by experts according to their knowledge and manual comparison with external sources.
What is of concern is Turnitin's® apparent inability to identify the similarities evident by a manual comparison of the source and outputs.
Currently, the bottleneck of this mining process is the unification of similar BASs, which requires a manual comparison of about 100 candidate BAS structures.
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In this case, manual comparisons were performed between the emails provided by Genentech, and the Congressional Record, requiring Pear to intelligently target his search against a particular set of data.
Furthermore, manual comparisons are only possible for small (random) subsets of event.
In order to avoid the problems resulting from manual comparisons, we propose a quantitative test that automatically measures the degree by which reconstruction systems deviate from the principle of vowel purity.
Multiple sequence alignments of the full-length protein sequences were performed using MUSCLE 3.52 [ 63], followed by manual comparisons and refinement.
GO browsers, such as AmiGO (http://amigo.geneontology.org/) and QuickGO (http://www.ebi.ac.uk/ego/), provide information retrieval capabilities, allowing for manual comparisons of genes and their annotations.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com