Sentence examples for mantel function from inspiring English sources

Mantel's tests were performed in R (mantel function) between each of the 30 genetic distance matrices and each of the five environmental distance matrices (150 tests).

Using the mantel function of the 'ecodist' package, the effect of precipitation distance on trait distance while controlling for spatial distance was estimated and tested with 1000 permutations and one-sided tests.

Mantel's tests were performed using the "mantel" function from the vegan package (version 2.0 10) in R. To estimate the false discovery rate in our CNV calls, the method of Baross et al. [ 101] was applied.

Matrices of pairwise Reynold's genetic distances were submitted to nonmetric multidimensional scaling analyses, using the function metaMDS of the vegan package in R. The mantel function of vegan was used to test the significance of correlation coefficients between matrices of pairwise geographic and genetic distances with Mantel tests.

The other second-floor bedroom, with a wood-burning fireplace with a marble mantel, functions as a family room.

We used the function mantel (with the method kendall and with the default of 1000 permutations) from the R-package vegan [21] to calculate the correlation coefficient between the property difference matrices and the amino acid substitution matrices.

The function mantel from the vegan package was used (Oksanen et al., 2013).

The difference between the fitted Kaplan Meier curves was assessed using the Mantel–Haenszel test (function survdiff) (Harrington and Fleming, 1982).

A review that summarised the clustering/cluster detection methods most commonly applied in epidemiology identified Diggle and Chetwynd's bivariate K-function, Mantel-Bailar's test and the Potthoff-Whittinghill method as the most preferred global methods and spatial scan statistics as the most preferred local method (Auchincloss et al. 2012).

Mantel-Haenszel procedure and p ≤ .05 were used to assess items with differential functioning.

In addition, these 150 tests were repeated as partial Mantel's tests (mantel.partial function) controlling for geographical distance by sea, in order to remove the effect of isolation by distance from the correlation tests.