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This method uses a manifold alignment based approach and is an extension from their previous framework [43].
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Along with the aforementioned metric, a manifold alignment term based on label information is also introduced into the objective function.
To this end, we first define the local kernel alignment based on centralized kernel alignment.
Katoh, K. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform.
Personal alignment based on relationships.
Alignment based methods can be further divided into sequence alignment based and structural alignment based methods.
Causal alignment based on shared values.
Forced alignment based on environmental or situational factors.
Finally, we filtered the alignments that showed alignment rates less than 50% of the full-length copies and filtered redundant alignments based on the GeneWise score.
The proposed method was compared with Canonical Correlation Analysis (CCA) [45], correspondence-based manifold alignment [43], and manifold regularization [44] (target only).
The results showed the proposed method performed the best followed by manifold regularization, correspondence-based manifold alignment, and CCA being the worst performing in this case.
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