When you re-read a page, data is collected; when you highlight a line or make an annotation, data is collected; even when you give up on a book, data is collected.
Curators evaluated completeness by examining the articles together with their community annotations and searching for experimental results for which the submitter failed to make an annotation.
The source of the information used to make an annotation includes both a specific reference, usually a published scientific article represented by a PubMed identifier (PMID), that describes the result of an experimental or computational analysis on which the association was based, and an evidence code (Table 2) that reflects the type of experimental assay or analysis that supports the association.
This annotation represents our best effort at making an automated annotation.
The products of two genes flanking gene Glyma10 g39150.1 on chromosome 10 (Glyma10 g39160.1, Glymare g39170.2) arequivalentlyly good matches to the three β-conglycinin subunits (α, α' and β) (percent identity > 0.50, expected value < 1.0e-50), making a precise annotation difficult for those two genes.
Asynchronous JavaScript and XML (AJAX) [ 23] is used to make the web interface more dynamic and improve the responsiveness of many processes, especially in the model annotation interface where a given page does not have to be reloaded each time a curator makes an incremental annotation.
We used this tool to make an initial annotation of NTLs in the human genome by processing three exemplary chromosomes.
To date, several thousand sequences have been recorded, which makes a manual annotation of all landmarks practically impossible.
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If the review indicated that any change needed to be made to an annotation set, that gene was scored as 'updatable' and the type of update was recorded for the flagged annotation.
