Sentence examples for make use of sequenced from inspiring English sources

Imputation of genotypes in a study sample can make use of sequenced or densely genotyped external reference panels consisting of individuals that are not from the study sample.

Most orthology determination methods make use of sequence comparisons: the amino acid sequences of all proteins in two species are compared with each other, and the two sequences that are most similar are considered to be orthologs.

First, we make use of sequence-derived features.

The machine learning models did not directly make use of sequences as features except the HMMs.

Other approaches make use of sequence similarity to reconstruct the underlying evolutionary history of genes (see, for example, Wapinski et al., 2007a, b).

In addition to network topology information, all network alignment algorithms excluding NETAL and MAGNA (Saraph and Milenković, 2013) make use of sequence similarity to help improve alignment accuracy.

Three other methods tested make use of sequence conservation information only: ConSurf (Landau et al., 2005), ET (Mihalek et al., 2004) and INTREPID (Sankararaman and Sjölander, 2008).

While INTREPID is designed to make use of sequence information alone, it can be used as a component in a prediction protocol that attempts to combine sequence information with other types of information.

We initially thought that the weightage of gene context similarity score should be much lower that of the sequence similarity as many existing methods make use of sequence similarity but not gene context similarity.

The ability of these programs to make use of sequence data from other species has allowed both Twinscan and EuGene to predict over 1000 genes that are intergenic with respect to the most recent annotation release.

Indeed, previous studies (Li et al., 2006; Rasmussen and Kellis, 2011) have shown that even the most accurate phylogeny reconstruction methods, such as neighbor joining (NJ) (Saitou and Nei, 1987) or maximum likelihood (ML) [e.g. RAxML (Stamatakis, 2006), PhyML (Guindon et al., 2010)], that make use of sequence information alone, often produce erroneous estimates of the gene tree topology.