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Among 150 measured metabolites, 68 were annotated with a name matching an entry in the EcoCyc database, of which 49 could be mapped directly to the major connected component of the metabolic pathways and thus used for subsequent analysis.
The entire graph extracted from the PubMed sample has one major connected component comprising 88 477 (38%) of the total of 232 760 nodes.
37 In case of the 25(OH D-associated genes (Fig. 3A), there is OH D-associatedcted component centered around lactotransferrin (LTF), an iron-bindingenestein that plays a major role in immune processes.
For instance, we reduced the gene-gene interaction analysis from 172 to 24 SNPs that resided within the major connected component with the largest number of vertices (i.e., main effects).
This finding was further confirmed looking at the size of the major connected component (i.e., the largest subgraph in which each node can be reached from any other node): Only approximately 21% of the "Mapped" component was linked in a single cluster.
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There are two major connected components identified by DCglob comparing ER- and ER+ breast cancer.
The model partitions a network into three major components: the largest strongly connected component (SCC), wherein all nodes are mutually reachable, a component of all nodes from which SCC can be reached (IN) and a component of all nodes reachable from SCC (OUT).
On the other hand, in the organ morphogenesis module, we noticed that the largest connected component contains two major clusters.
CC (connected component): detecting sub-graphs (components) connected with edges.
Connected component analysis identifies and labels connected leaf pixels as separate components.
The largest connected component in a network is called the giant connected component.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com