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Recent molecular phylogenetic studies [21], [22], [23] revealed a well supported clade with on average twice the level of sequence divergence (the so-called long branch clade, LBC) when compared to a second major clade with lower levels of sequence divergence (the so-called short-branch clade).
The maximum parsimony tree showed one major clade with six internal branches.
The two gymnosperms are part of the major clade with vascular plants although in separate lineages.
In Figure 4B the triangles represent the divergence between the elements within each major clade, with long triangles indicating great divergence.
Analysis of 103 paralogs and orthologs of cellulase-encoding gene(s) (fragments) from plant parasitic Tylenchida revealed a major clade with a topology similar to the one revealed by SSU rDNA, a neutral gene.
The Hoplopleura species, which we investigated in the current study, are in the major clade with the lice of bovids (family Linognathidae), rabbits and shrews (genus Pterophthirus of the family Hoplopleuridae; genera Haemodipsus, Linognathoides, Neohaematopinus and Sathrax of the family Polyplacidae), and sea lions and seals (family Echinophthiridae).
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Molecular phylogenies, inferred from rRNA sequences in ribosomes, suggest that the Chytrids are a basal group divergent from the other fungal phyla, consisting of four major clades with suggestive evidence for paraphyly or possibly polyphyly.
The congruent tree recovered two major clades with clear relationships among the endemic cyprinids.
However, both analyses generated high statistical support for the major clades, with the exception of the VGI and VGII clades of the URA5 phylogram (Figure 4).
The phylogenetic tree revealed three major clades with many members in each clade (fig. 2).
Maximum likelihood separated the 27 ITS sequences into two major clades, with S. guttata as outgroup.
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CEO of Professional Science Editing for Scientists @ prosciediting.com