Sentence examples for maize were retrieved from inspiring English sources

The protein sequences from Arabidopsis, rice, sorghum and maize were retrieved from the publications [ 7, 15– 17].

Four RNA-seq datasets (i.e. SRP008505 for brachypodium, SRP008821 for rice, SRP008469 for sorghum and SRP006463 for maize) were retrieved from NCBI were used to detect expression signatures for relics.

Maize siRNA sequences were retrieved from the Cereal Small RNAs Database (http://sundarlab.ucdavis.edu/smrnas/).edu/smrnas/

To match the user input cDNA to the maize genome, full-length cDNAs were retrieved from the maize, rice and Arabidopsis genomes using their GFF files and respective genome data [ 3, 31, 32].

To investigate cis-elements in promoter sequences of maize nsLTP genes, the upstream sequences (~1000 bp) of each identified ZmLTPs were retrieved from B73 maize genome sequence using a Perl script.

In general, the sequence length covered by each AS type did not significantly differ between maize and teosinte.> To study the relationship between intron retention and transposable element (TE) insertion, 9,299 and 3,547 of the retained introns were retrieved from IR isoforms of maize and teosinte, and then searched against a repetitive DNA element database.

In addition, binding sites of five maize and one Arabidopsis WRKY transcription factor and one additional W-box motif were retrieved (Additional file 7: Table S4).

Their sequences were retrieved from GenBank and used as queries in a BLAST search against all maize sequences to confirm that these linked SSR markers were not designed from the same gene.

UniProt accession numbers for all the maize GST proteins that are present in the file "Gramene_Protein_Desc.txt" from the GRAMENE FTP site (ftp://ftp.gramene.org/) were retrieved.

Firstly, existing toolboxes were retrieved.

Sequences were retrieved from the Ensembl database65.