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In particular, we have analyzed base composition, periodicity and information content in sets of aligned promoters clustered according to functional information in order to obtain an insight on the main structural differences between promoters regulating genes with different functions.
The main structural differences between domain repeats concentrate in the size and conformation of the loops, connecting strands.
The main structural differences between the V-ATPase A3B3 complex and the α3β3 sub-domain in F1 are observed in two regions in the A subunit.
The main structural differences rely on short peptide chains at the N-terminus of threonine and on a substituent of the tyrosine ring.
The three ancestral proteins, AncMDH2, AncLDH*, and AncMDH2-INS, are all highly similar (RMSD 1.20 Å) with the main structural differences found in the conformation of the specificity loop.
The 500 best-scoring models (solutions) were grouped on the basis of RMSD into four clusters (C1-4, Figure 2 figure supplement 3), the minimum number required to fully represent the main structural differences between the best scoring models.
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The main structural difference between the pandemic and the non-pandemic structure is due to a nonsynonymous substitution in the 150 loop, which contains the active site of NA, at position 149.
Apart from the type of cycle (two- or four-stroke), the provision for mounting is the main structural difference among automotive, marine, stationary, and aviation engines.
The two polymers have the same π-conjugation with the main structural difference being the presence of the spiro-anthracenyl substituents orthogonal to the polymer backbone of P2i.
The interfacial structure of prismatic crystal faces is similar in pockets and in intergranular films, with the main structural difference being a reduction in order as a function of distance from the prism plane, which is related to the film thickness.
The main structural difference is that GAK/auxilin 2 has an additional N-terminal kinase domain.
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