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While this representation is interesting to understand the effectiveness of JSD as a genetic divergence measure, it also confirms the findings of [11] regarding the main evolutionary scenario for CN.
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Two main evolutionary scenarios have been proposed.
In the first section a brief survey of the main proposed evolutionary scenarios for the principal types of organelles that can be found in a typical eukaryotic cell is presented.
In the obtained consensus network, the weight-based consensus tree and the reticulation branches can be regarded as the main and alternative evolutionary scenarios, respectively.
The coordinated changes in expression of all main photorespiratory enzymes strongly suggest an evolutionary scenario for the origin of C4 photosynthesis.
The overall evolutionary scenario of the three main S. meliloti replicons could be approximated as in figure 7. The chromosome contains most of the housekeeping functions and originated mainly by vertical descent from S. meliloti phylogenetic relatives.
The patterns of phenotypic and ecological divergence are consistent with an evolutionary scenario with at least five main adaptive peaks during the early radiation of phyllostomid bats.
The main drawback of reconciliation is that the inferred evolutionary scenario is strongly dependent on the considered gene trees, as few misplaced leaves may lead to a completely different history, with significantly more duplications and losses.
While the entire γ-secretase complex does not seem to be pan-eukaryotic, our analysis nonetheless supports an altered evolutionary scenario than that formerly proposed for its main player, Presenilin.
Before assessing the contribution of each of the different processes and refining the evolutionary scenario for the emergence of the two distinct lineages, we will recapitulate the main results by focusing particularly on contrasting zones of the distribution area that appear to be major historical entities.
We propose an evolutionary scenario in which the diversity of metazoan bHLHs has been established in two main steps, one during the early evolution of metazoans, before the divergence of demosponges from other metazoans, and the second, later, after this split but before the divergence of cnidarians and bilaterians.
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