The genes also partitioned into two main clusters; the larger cluster consisting of genes up-regulated in response to smoking, the smaller cluster containing down-regulated genes.
With the PAM the best classification of co-expressed transcripts gave again two main clusters: the testicular transcripts versus the other tissues transcripts.
The hierarchical clustering analysis revealed two main clusters (the ER-positive and ER-negative tumours of the breast), in concordance with results from large-scale microarray analysis.
As well as the two main clusters, the LPS operational population contained four and five individuals, respectively, belonging to the black and yellow clusters.
Unsupervised clustering using pathway deregulation scores of 272 pathways showed that the tumors formed 2 main clusters, the left branch with 12 samples (referred as Cluster 1) and the right with 15 samples.
A vehicle that lies within the range of two cluster heads will cluster with the closest cluster head to itself given the priority to the main cluster over the temporary cluster.
The density of materials at the main cluster of the site excavated by Leakey contrasts with the bone and lithic scatters surrounding the site.
Codons with G or C in the third codon position were observed frequently in the Main cluster, distinguishing the Main cluster from Sub-cluster 1 and Sub-cluster 2. Furthermore, RPS15, RPS29, RPL3, RPL28, RPL39, and RPL41 did not belong to any cluster.
Majority of the genotypes (8 out of 10) representing subspecies hypogaea (6 hypogaea and 2 hirsuta genotypes) were found in the main cluster A. The genotypes belonging to fastigiata subspecies were grouped mainly under the main clusters B and C. The grouping of genotypes representing two subspecies in different clusters agrees with the classification of groundnut botanical varieties [ 44].
The main cluster of the tree in Fig. 4 comprises prokaryotes and several eukaryotic sequences (Fungi, Metazoa, plant chloroplasts).
