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Samples with similar spatial characteristics and relationships were clustered together at low linkage distances, whilst dissimilar samples are clustered at higher linkage distances (Banoeng-Yakubo et al. 2008).
For the second strategy, also for low linkage disequilibrium combined with a low density 5,000-SNP 5,000-SNP average achipacy of genomic predicthens waverage, which is substaccuracy higher than accuracies based of pedigenomiclationshipredictions
On the genomic level, simulation combined high and low linkage disequilibrium with 5,000-, 5,000-,, and 50,000-SNP chip applications to simulate different scenarios of genomic architecture.
Recently the European Court of Auditors ([2011]) criticised 1) the low level of targeting of AES, 2) the low linkage between incentive systems and the environmental benefits provided, and 3) the weaknesses of the current evaluation and monitoring systems in measuring environmental benefits and in the additionality measuring.
The formation of ISR in H. pylori increases allelic diversity, and contributes to the uniquely low linkage disequilibrium characteristic of this pathogen.
The bovine prion gene (PRNP) contains regions of both high and low linkage disequilibrium (LD) that appear to be conserved across Bos taurus populations.
For complex genetic diseases in particular, these problems lead to generally low linkage scores and poor agreement between different linkage studies.
H. pylori is characterized by a uniquely low linkage disequilibrium [7], and ISR are likely to contribute strongly to this allelic diversity, together with an overall high rate of recombination and a relatively short length of imported fragments.
Haplotype-based association mapping could possibly address these last two points, however the low number of SNPs per gene, the lack of phased data, and the low linkage disequilibrium within teosinte (A. L. Weber and J. F. Doebley, unpublished results) make this strategy difficult to implement and unlikely to yield more power.
SNPs with low linkage disequilibrium analysis (r < 0.8) were retained.
And these two SNPs represent low linkage disequilibrium.
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