This decrease was associated with the calculation of bond strength assuming constant bond stress distribution while higher non-linear distribution of bond stresses normally happened with longer embedded length in concrete.
As in other BMI experiments, we use the firing rate as the input over all channels within 100 msec windows, which have been embedded in longer time windows using a gamma memory structure [35].
Some LCRs were embedded in longer amino acid sequences that had no counterparts in one or more homologous proteins from other species.
Together, the two benchmarks approximate the setting where users are interested in identifying local RNA secondary structure motifs embedded in longer RNAs (such as mRNAs), in spite of the presence of a few entirely spurious, unrelated RNAs among the input sequences.
However, DNA binding assays where RE sequence are embedded in longer DNA molecules, competitive binding experiments in microfluidics, Chromatin Immunoprecipitation assays, yeast- and mammalian-cell based transactivation assays all indicate that even a single nucleotide spacer between p53 RE half sites can reduce transactivation potential [ 5, 24, 27, 44].
When a shorter ORF is embedded in a longer ORF with the same reading frame, only the longer one is reported.
Abstraction: identification of GO or ChEBI terms embedded in a longer GO term, and replacement of this embedded term with a generic GTERM token, for an embedded GO term, or CTERM token, for an embedded ChEBI term.
The three transformations we perform are as follows: Abstraction: identification of GO or ChEBI terms embedded in a longer GO term, and replacement of this embedded term with a generic GTERM token, for an embedded GO term, or CTERM token, for an embedded ChEBI term.
