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However, many studies have revealed that eQTLs can be identified for some GWAS risk loci (testing index SNPs or SNPs in high LD with the index SNPs); in these cases, the association of the SNP and expression of nearby genes was identified in a trait or disease-specific manner [ 72– 72].
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Rather than preselecting null loci, GCB delineates loci associated with disease as 'outliers' relative to most of the loci tested.
The twelve microsatellite loci tested on the synthetic pools were characterized by mean of penalized GLM analysis.
However, of the 48 nuclear polymorphic loci tested, 40 gave results that indicate the nuclear identity of NT-1 cells and donor B cells while eight gave results that point to the contrary.
We used eight SSRs to study the genetic diversity of four E. phyllopogon populations collected from rice fields in China and all eight loci tested were polymorphic.
The one-time success rate of targeted gene disruption is about 90% for more than 100 genomic loci tested, with the mutation frequencies often reaching above 50%.
Our predictions were tested by allelotyping a panel of approximately 30 individuals for 5% of these regions, confirming polymorphism for more than half the loci tested.
Similar patterns of expression were observed during panicle development for 21-nt phasiRNAs from the four phased loci tested (Additional file 12).
Overall description of viral genomic structure based on the sum of all loci tested.
The remaining six microsatellite loci tested were polymorphic but only three could be amplified reliably (Table 2).
Third, for all loci tested by quantitative PCR, the relative binding ratio of p63 and p73 is similar.
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