Sentence examples for loci scheme from inspiring English sources

Hence, for ease and resources reasons, we choosed this scheme, which was less expensive in time and money than the combined spoligotyping-12 VNTR loci scheme, i.e. MIRUs [ 17].

In such as a case, the 12 highly discriminatory loci scheme consisting of the most polymorphic loci and requiring less time and labor deems suitable for non-Beijing family strains.

Furthermore, the 12 highly discriminative loci scheme developed in this study showed a resolution equal to that of IS 6110-RFLP and 24-locus MIRN-VNTR for discrimination of non-Beijing strains.

The Hunter Gaston discriminatory index improved significantly to 0.972 with the modified 15-locus scheme, including ETR-A, ETR-B, and ETR-C, compared with 0.951 for the previously reported 12-locus design.

This five-locus scheme generated 23 STs and addition of dprA, pfk, or bcaT loci individually generated 24, 25, and 25 STs respectively, whereas only the simultaneous addition of pfk and bcaT increased the number of STs to 26.

In addition, the pfk and bcaT loci are located only 51 kbp apart in the three sequenced genomes, and the phylogenetic tree generated by the concatenated sequence from the six-locus scheme did not change either its topology or its robustness relative to the seven-loci tree (data not shown); consequently, the pfk locus was removed from the scheme.

Further scripts were used to establish COG-cgMLST locus scheme initially containing 1866 loci.

A standard seven-locus scheme (Maiden et al. 1998) was used to determine multilocus ST.

MLST was performed using the 7-locus scheme described on the Salmonella MLST database (http://web.mpiib-berlin.mpg.de/mlst) (21 – 21 ).

The EFG1 gene is a paradigm of both PKA and Efg1 binding to a genomic locus (scheme of main events in Figure  7).

Compared with the 24-locus MIRU-VNTR, one more cluster was identified by this 12-locus scheme, which contained 2 isolates (SC169 and SC172) belonging to Beijing family (SIT1).