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Sequence and phylogenetic analyses showed that most Old World monkeys shared five classes of KIR loci: i) KIR2DL5/3DL20 in the most centromeric region, followed by ii) the single Ig domain-encoding locus KIR1D, iii) the pseudogene KIR2DP, iv) the conserved KIR2DL4, and v) the highly diversified KIR3DL/H loci in the telomeric half of the cluster.
Thus, the annotations of these two classes of MIR loci (i.e. variant and siRNA-like) should be reconsidered.
Differentially expressed genes in three comparison groups with no-interaction at Sa and Sb pollen sterility loci (i.e. harboring neutral genes at Sa and Sb loci).
To test that the basic model structure (i.e., using a Boolean genetic system) did not violate the analytical results of Crow and Kimura [9] or Bürger [10] specifically, that the rate of change of genetic variance was inversely related to the number of underlying loci—I changed the network model discussed above by defining the genetic architecture as a linear Boolean [0,1] string.
Hemimethylated loci (i.e. loci with fragments present in EcoRI/HpaII digestions but absent in EcoRI/MspI digestions) were excluded from genetic and epigenetic analysis.
All trace files were visually scanned for overlapping peaks as indicators of amplification from multiple loci (i.e. paralogs).
Similar(14)
All other estimated parameters are for the locus i in the notations.
KL and KU are the number of observations for locus i up to T0 and after T100, respectively.
It is possible that these loci may be linked to an adaptive locus (i.e. had their frequencies changed by genetic hitchhiking [34]).
The relative power at locus i was defined as.
Given locus i and tissue j, the tissue specificity score is defined as the difference between the expression of locus i in tissue j (denoted exp i, j ) and the mean expression of locus i (denoted as μ i ).
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com