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When examining whether miRNA seeds in different locations of coding region have different synergistic effect, we found that seeds residing very close to the stop codon frequently mediate very strong effects (two times more than the average effect) on mRNA levels in most experiments (eight/ten) (Figure S2).
For each gene model, it provides the predicted locations of exons, and for most genes also the locations of coding regions, start and stop codons.
Because the locations of coding regions in yeast DNA are well annotated, we were able to convert the list of true positive protein matches to lists of true positive locations on yeast chromosomes, as described in the Methods section.
Last year Apple upped its game another notch, randomizing the location of code in memory so that hackers can't even locate commands to hijack them.
As the reference we used the data on the transcript length and location of coding sequences from the ECMT (conservatively, the longest transcript per gene was selected if more than one was available).
Intron lengths were inferred from the coordinates of coding sequence (CDS) features which specify the locations of protein-coding regions within a gene.
Genome annotation involves a process of identifying the locations of the coding regions (and associated genes) in a genome.
Locations of protein coding genes were preliminarily identified by the ORFs finding method from GeneQuest, followed by BLAST searching on GenBank datasets.
where the superscript of ∅ and f denote the location of the code.
The segmentation method consists of two main stages: removal of rectangle boxes and location of ZIP code digits.
Location of care was coded from three variables assessing setting and sector obtained from both administrative data and survey data; codes were applied only to cases where these two sources were concordant.
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