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These well established techniques, though dependable, can be time-consuming and limited by the number and location of markers and RFLP single nucleotide polymorphisms (SNPs).
The location of markers is given in cM, quoted from the top of each linkage group.
Thus, differences might also be explained by variation in the genomic location of markers.
CluePedia automatically extracts the cellular location of markers from GO terms and maps it on pre-defined cellular compartments.
The location of markers that were not included in the consensus map was extrapolated from that of flanking markers.
In this study, 21 nullisomic-tetrasomic lines lacking each pair of the 21 homologous chromosome pairs were used to determine the location of markers.
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The physical locations of these QTL were inferred based on the physical location of marker information, which was posted in SoyBase as soybean map version 4.0, and the only QTL with a locatable marker was used for this analysis [ 27].
*Redundancy refers to co-location of markers at the same genetic locus.
Locations of markers unavailable in the consensus map were extrapolated based on flanking markers.
Map locations of markers are based on the UC Santa Cruz Genome Browser, March 2006 Human Genome Assembly.
To identify introgressed alleles we also used evidence from mapped locations of markers, phenotypic descriptions, and historical origins of lines and accessions.
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CEO of Professional Science Editing for Scientists @ prosciediting.com