Sentence examples for localization program from inspiring English sources

Additionally, the localization program used in the annotation protocol may differ from the localization program provided to users of the genome browser.

Therefore, the choice of the appropriate localization program depends on the specific purpose of the researcher.

All sequence tags or full-length genes were passed to the localization program as a single file in Fasta format [ 23] (Table 1).

(2) Δ 2 = σ 2 + a 2 12 N (16 9 + 4 τ ) With τ roughly equal to the ratio between the background intensity and the peak signal intensity, which can be directly obtained from the FISH-quant localization program.

The subcellular localization program WoLF PSORT (Horton et al. 2007) predicts that the downregulated and upregulated enzymes should localize to the mitochondria and cytosol, respectively, consistent with a previous report that corals contain both mitochondrial and cytosolic glutamate dehydrogenases (Dudler et al. 1987).

Several subcellular localization programs, such as TargetP [2] are available that predict these cTPs, with the number of predicted chloroplast (plastid) proteins ranging from about 1500 to 4500 proteins [3], [4].

The other sub-cellular localization programs have differential accuracy for different sub-cellular localizations.

In contrast to the near-perfect recall exhibited by the localization programs, the precision of the programs suffers from a substantial incidence of false positives.

Furthermore, the PGD3 protein is predicted to be targeted to the chloroplast by the protein localization programs: TargetP, PSORT, and Predotar [ 35- 37].

This is because each browser uses a different combination of localization programs, sequence analysis tools, and manual curation to arrive at their final annotations.

With respect to recall, our study shows that researchers who wish to link a sequence with information associated with the genome may confidently use any of the three localization programs considered in this study.