Exact(6)
Arg biosynthesis seems to be localised predominantly in plastids, with some ambiguous localisation prediction of enzymes in the cytosol [ 3].
Localisation prediction programs used were PSORT [ 43] and TargetP [ 44].
Data on subcellular localisation prediction were taken from the ARAMEMNON database [ 22, 53].
Subcellular localisation prediction was performed using the TargetP software (http://www.cbs.dtu.dk/services/TargetP) [ 78].
Functional annotation of genes was based on [ 5] and included Interpro protein domain prediction [ 109], Protfun protein function prediction [ 110] and TargetP protein localisation prediction [ 111].
Protein interaction data have been considered previously in the prediction of protein subcellular localisation, including for whole-cell protein localisation prediction [ 16, 40, 41] as well as by most of the nucleolar binary predictors [ 23, 24, 26].
Similar(54)
The distribution of 5 of the most frequently found Pfam domains among the genomes is shown in Figure 2. Protein localisation predictions: Protein sub-cellular localisations were predicted using SignalP [ 33], PSort [ 34] and Wolf-PSort [ 35] with the default parameters.
Differently from HPLF, a plastidial localisation was predicted for HPLE, a putative N-terminal transit peptide of 59 amino acids was predicted by ChloroP prediction software.
Combined MRS and T2 weighted axial MR helps to improve the localisation of GTV and prediction of extracapsular extension.
Further investigation of children with confirmed UTI has a number of different clinical aims: the localisation of infection, the prediction and detection of renal scarring and the detection of VUR.
The S. cerevisiae mitochondrial CBR sequence, ScMCR1 (GenBank accession: NP_012221.2), was then used as a query in further BLASTp analyses to determine whether CBRs identified with a TargetP prediction of localisation to mitochondria were indeed more closely related to this sequence than SsCBR1.
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