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Local alignments align subnetworks to maximize the local alignment score.
Percent identity (PID) and percentage of aligned length (PL) were calculated as measures of local alignment.
Basic local alignment search tool.
reversed position specific basic local alignment search tool.
Assortative mixing patterns suggest a propensity to the local alignment of behavioral patterns between connected nodes.
This indicates that local alignment scores are very suitable for making predictions with C5.
Similar(5)
The factors were priming level (global, local) × alignment (aligned, misaligned) × congruency (congruent, incongruent).
Local-alignment anchors were detected using PatternHunter (1e-10) [ 41].
These models were also built for local/local alignment.
The obtained sequences were aligned and analyzed using Basic Local Alignment Search Tool (BLAST; http://blast.ncbi.nlm.nih.gov).nih.gov
An example is the program BLAST (Basic Local Alignment Search Tool).
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