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Using the default settings, load a data file into Sherpa.
In the present study, we sampled the solution space of the constraint-based models using default settings by loading 2000 points per reaction, i.e. 2000 flux values per reaction were provided for subsequent analysis.
The contour_resid function can be called with no arguments, in which case a contour plot of the data-minus-model fit residuals is made for the default data set loaded in the Sherpa session, with the default settings.
The contour_ratio function can be called with no arguments, in which case a contour plot of the data-to-model ratio is made for the default data set loaded in the Sherpa session, with the default settings.
BLASTX results were loaded into the program and the default settings were used to assign GO terms to all unique sequences.
The contour_model function can be called with no arguments, in which case a contour plot of the model associated with the default data set loaded in the Sherpa session is visualized, with the default settings.
The "Default Settings" is the version of Windows that will be loaded for any application that does not have a specific operating system set.
We then loaded the matrix as relative expression data into Expander and ran SAMBA using default settings, resulting in 29 biclusters.
Default settings were used.
with default settings.
New research on default settings.
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