Combining these two CCR gene lists results in a set of 846 genes, and 543 (64%) of them are reported in our new CCR list.
Generally, the task of ligand-based VS is to output a ranking list of a set of molecules in terms of their binding affinities for a given drug target, so that the top-k molecules can be further examined through in-vivo or in-vitro test.
We explored the relationship of this gene list to a set of genes expressed in different anatomical segments of the normal kidney including the cortex (cortex gene set) and the glomerulus (glomerulus gene set), and a gene set expressed after serum stimulation of quiescent fibroblasts (the core serum response or CSR gene set).
To identify biological threads in the SPC signature that would provide insight into ccRCC tumor biology, we compared this gene list to a set of genes expressed in different anatomical segments of the normal kidney [8] and a gene set expressed after serum stimulation of quiescent fibroblasts [9].
The combined list was enriched in a set of processes similar to those enriched in the individual lists (Table 2).
ISI Web of Science allows the routine automated listing of all authors in a set of papers according to diminishing number of papers to which they have participated.
We present CisFinder software, which generates a comprehensive list of motifs enriched in a set of DNA sequences and describes them with position frequency matrices (PFMs).
Our goal here is to compute the dimension of L G for the groups associated to the equivariant models listed in Definition 4, and to list a set of independent linear equations defining this space.
Two subtasks in CHEMDNER are specified in the challenge: ➢ Chemical Document Indexing (CDI): The required output of this subtask is a ranked list of unique chemicals mentioned in a set of given documents.
By comparing the imported microarray data with the IPKB, the list of genes was transformed in a set of relevant networks, focus genes and canonical pathways were identified, and functional annotation was performed.
Each related hypothesis set in the hypothesis set list represents a set of hypotheses exclusive between them, representing different alternatives for mobiles configurations temporally or visually related.
