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A listing of DNA sequences and their modifications are provided in Table S1.
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List of DNA extracts analysed for DNA viral detection of the Chelonid fibropapilloma-associated herpesvirus (CFPHV) including, sample ID, species, type of tissue, and population origin.
TIGR scientists said they had communicated their list of DNA differences to Dr. Keim, who is testing the Ames strain samples in his collection to see if he can now distinguish among them.
Table 2 Showing submitted list of DNA Barcoding Sequences of Antilope cervicapra in BOLD and NCBI BOLD database with BOLD IDs and Accession No respectively BOLD IDs VDBAC013 17 VDBAC011 17, VDBAC010 17, VDBAC009 17, VDBAC008 17, VDBAC007 17, VDBAC006 17, VDBAC005 17, VDBAC004 17, VDBAC003 17, VDBAC003 17.
Table 1 The list of DNA sequences used in this study Oligonucleotide Base sequence DNA capture probe 5′-TCA TCG ACC TGT AAG-3′ [AmC3] Linear target sequence 5′-TCA AAC CGT GCT GAA CTT ACA GGT CGA TGA-3′ 3 bases mismatched DNA 5′-TCA AAC CGT GCT GAA CTT GTC GGT CGA TGA-3′ Non-complementary strand 5′-CGT GGT TTT ACC ATT TGC AAC AGC A-3′ Reporter probe 5′-TTC AGC ACG GTT TGA.
A complete list of DNA sequences involved in pAPEC-1 functions are presented in Table S3, however, details of most interesting traits within this region are discussed below.
The next section displays a list of DNA baits associated with the gene (e.g. gene promoter sequences).
A complete list of DNA constructs as well as plasmids and primers used for cloning can be found in Supporting Information.
Additional features are available for genes that encode TFs, including a link to the TF page (see below), and a list of DNA targets the TF interacts with.
A similar approach has been applied by (Eden et al., 2007) to discover TF binding motifs in ranked lists of DNA sequences.
This heuristic approach, called mmHG-Finder, takes as input a ranked list of DNA or RNA sequences and returns significant motifs in PWM format.
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