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When this happens all the csdrec vectors will be removed from the internal list of vectors to be recorded.
This returns a list of samples, where each sample is a list of vectors of marks in the same format as the output of continuation-mark-set->list*.
All of the sources consulted are listed in Supplementary References (Part 2), while the resulting list of vectors and diseases is available as Supplementary Data 2. Speciation rate parameters were modelled on the time-calibrated tree using BAMM12.
Although not shown here, the limits array can be replaced by a list of vectors - the same number as used for the error values - if limits along different axes are needed.
After executing MODEL-IDENTIFY T,q), in line 1, the array T is converted into a list of vectors V using procedure INIT(T,q) (see AlgorithMODEL-IDENTIFY T,q
Applied to a list of vectors, it builds a block-diagonal matrix with the listed vectors placed on the main diagonal of the block-matrix, respectively.
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With the long list of vector species potentially harbouring and transmitting R. felis, the situation is different to other vector-borne pathogens where the vector hosts and reservoir are limited to specific species.
The considered configurations, instead of assigning each individual to a single cluster, are lists of vectors (one for each individual) carrying their probability to belong to each cluster.
SeqMap 2.0 allows a user to: (i) upload full sets of 454 pyrosequencing reads, (ii) create savable lists of bar codes and identifiers, (iii) create savable lists of vector features to mask from each read and (iv) identify the appropriate reference genomes to which RISs should be mapped.
To shorten the list of shRNA vectors to be validated, we first asked where shRNA vectors targeting known components of the p53 pathway were positioned in the top 100.
A list of the vectors is given below.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com