Sentence examples for list of alignment from inspiring English sources

These results are hyperlinked to external databases, and include the list of alignment descriptions and details about the pairwise alignments of each transcript with the corresponding BLAST hits.

BLAST results, both for nucleotide and protein database searches, are shown in a dedicated section in the classic BLAST output format, hyperlinked to external databases, and including the list of alignment descriptions and details about the pairwise alignments of the transcript with BLAST hits.

The reduce function scans the list of alignments for each read and records the best alignment if an unambiguous best alignment exists.

A full list of alignments of the upstream region among the four mammalian species can be found in Supplement H (Supplementary Material online).

This yields a ranked list of alignments with associated scores (prediction method scores or alignment scores), which are used to rank the alignments and to select the best one.

In this fashion, repeatedly calling the routine WITH_DISTINCT_ENDS ensures that the final list of alignments does not contain an alignment that shares an endpoint with a higher-scoring alignment.

Both for nucleotide and protein database, results of similarity searches are shown in a dedicated section in the classic BLAST output format, including the list of alignments descriptions and details about the pairwise alignments with hits, each hyperlinked to external databases entries.

The output of the previous stage consists of two lists of alignments for each read, one coming from the read_CT and read_comp_CT conversions, denoted as CT_List, and the other from the read_GA and read_comp_GA conversions, denoted as GA_List.

Next, Stage D processes the batch, skipping the reads that were previously mapped in stage B. For each unmapped read in the batch, this stage uses the seeds produced by stage C to obtain a list of candidate alignment locations (CALs) or regions, which define potential mappings of that read.

The integrated list of molecule alignments was then used to identify SVs using a probabilistic method and a partial-alignment-based method.

This resulted in a list of pairwise alignments corresponding to repeats in the D. melanogaster and A. thaliana genome sequences.