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In order to detect apparent homoplasies when the species tree is assumed, we used CODEML to reconstruct ancestral sequences and list nucleotide changes occurring along each branch (with settings model = 1 to allow each branch its own dN/dS value, and NSsites = 0 to allow only one category of site).
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It is a term of art in patent law that renders the claim "open-ended" so that it covers both the listed nucleotide sequence and, more importantly, the listed sequence in combination with additional sequences.
This report is split into three parts: the first one containing general annotation on the isolate, mainly similar to the tabular presentation; the second one displaying OpenFluDB-specific annotations; and the third one listing nucleotide or protein sequences depending on the previously selected view.
These studies expand the growing list of nucleotide repeat disorders in which RAN translation occurs and provide evidence that RAN translation contributes to neurodegeneration.
Figure 4A shows a partial list of nucleotide variants of BART19-3p and BART3-3p.
A complete list of nucleotide content values for the 68 holometabolan dataset is given in Additional file 3. Codon usage was investigated by importing the complete cDNA datasets of 68 available holometabolan mitochondrial genomes, including X. vesparum and the sequenced genome of M. australiensis into INCA v2.1 [ 42].
The GListMaker routine generates k-mer count lists from nucleotide sequences, and the GListCompare tool performs basic algebraic set operations with these lists.
Compared to alternative molecular methods, a major advantage is that results are unbiased (a list of nucleotides) and highly reproducible, thus enabling the comparison of data from different laboratories and time periods.
Instead, the idea was to make a list of nucleotides that would represent an "average" person, then use it as a sample definition of what the human species looks like biochemically.
Table 2 lists the nucleotide sequences of the primers used.
Table 1 lists overall nucleotide diversity π and results of neutrality tests for Xpr1.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com