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In the long run, Germany and Japan envisioned a partnered linkage running across the British-held Indian subcontinent that would allow for the transfer of weaponry, resources as well as other possibilities.
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The main database (Crack User Hospital Admission Dataset) was used to perform a first record linkage run by searching the fields First Name + Last Name + Sex + Date of Birth in the Inpatient Database.
The nonmatching records returned in step (4) were used for a second record linkage run, by searching the fields First Name + Last Name + Sex.
The performances of the unencrypted bigrams, the phonetic encoding, and the Bloom filters was assessed by comparing the results of three complete record linkage runs with exactly the same parameters.
The latest linkage was run in June 2008, when cancers diagnosed in 2007 had almost been reported to the Finnish cancer registry.
The significance was determined empirically, by running the linkage test on ten permuted datasets.
In the example family under study, to perform linkage analysis using SwiftLink running on a four core processor took an average of ~30 minutes per chromosome.
Future research will involve evaluating linkage-related error by running k -link on a EST dataset from a species with a well-characterized repeat database.
Estimation of heritability and linkage analyses were run by use of the SOLAR program (version 2.1.3).
Hence, we performed tests for linkage disequilibrium and ran the program Haploview 4.1 which showed that the genome of the bison is mainly a mosaic of haplotype blocks where strong linkage disequilibrium between SNPs is observed (see please the last paragraph on page 5 and please see fig. 1, 2 and 3 where the blocks are shown graphically).
We input the updated genotypes of all 70 RILs and an additional individual purposefully created to be heterozygous at all sites (i.e., an F1 individual for the cross described here) into the program BEAGLE (Browning and Browning 2007); markers for each linkage group were run separately for computational efficiency.
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