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Bayesian methods for linkage analysis are useful because they allow for incorporation of prior information about allele frequencies, meiotic drive, and other factors important to linkage calculations.
Markers were then screened for suitability in linkage calculations.
*Three Icelandic pedigrees were separated in two parts each in the linkage calculations.
Two affected cases in one family (70234) were identical twins and only one of them was included in linkage calculations.
Four, we initially started linkage calculations using the markers with high fidelity to construct a framework map with LOD to 8.0.
* Except for the last column, numbers within parentheses refer to the number of families as processed in linkage calculations, in which three families were separated in two parts each due to large size (see Additional file 1, Figure S1).
Similar(51)
To establish the thrust force model, a magnetic flux linkage calculation algorithm is applied.
Inter-SNP linkage disequilibrium calculations for COMT were performed in Haploview (version 4.0 [71].
Linkage disequilibrium calculations (D') and plots were generated from genotype data in the trio cohort using Haploview.
The extraction of 5K spanning SNPs from HapMap and exhaustive pairwise LD (linkage disequilibrium) calculations for the selected 5K_HapMap dataset were performed on an IBM supercomputer (Model JS20) and a cluster computer (DualPowerPC970) with 100 nodes, and took four working days with most of the nodes.
Linkage map calculations were performed using JoinMap (v.4.1, Kyazma).
Related(17)
linkage methodologies
contact calculations
coupling calculations
linkage computations
linkage estimates
network calculations
linkage accounts
interaction calculations
linkage determinations
alignment calculations
matching calculations
linkage determination
linkage design
linkage elements
linkage barriers
linkage technologies
genetic calculations
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