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The last link in the model that has not been discussed is that of arrow 9 (Fig. 5).
We included this link in the model via mutual excitatory multiplicative feedback connections between MSTlModel and TOModel.
A rectangular region is stored in the Integrator along with the text inside the region, publication details and the identifier of the node or link in the model annotated by the region in the full paper.
We report the effect size as a result of origin as δ = e β, where β is the parameter estimate of the origin term, noting the log link in the model.
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For the gap gene system, however, where autoregulation is believed to occur, we allowed autoregulatory links in the model.
In the second challenge, participants were given an incomplete topology with 11 genes and asked to find three missing links in the model.
SPS results were also selected for PHN duration, as pain severity and duration are linked in the model and therefore should be retrieved from the same source.
We therefore ran a second challenge, the network topology inference challenge, where participants were given an incomplete topology with 11 genes and asked to find 3 missing links in the model.
After the graphical VAR model with minimal AIC score has been identified, the strength of the links in the model can be assessed by computing the so-called partial directed correlations and partial contemporaneous correlations as measures of strength of the lagged respectively same-time associations between variables [ 41].
The energy link proposed in the model is depicted by Equation (2).
We analyzed the qualitative phenotype under study, by considering the logit function as a link function in the model.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com