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cUnadjusted linear regression P-value.
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ORF length was shown to have a negative correlation with transcript abundance (gene expression intensity by microarray) and codon usage bias, so short genes are more highly transcribed than longer ones (regression analysis, p-value < 1.5e−11) and more codon biased (non-linear regression, p-value < 2.2e−16).
Groups were compared by using t tests, and associations were tested by using univariate linear regression (p value and standardized coefficient shown) and in a backward multiple linear regression model with the least significant variables sequentially removed, according to the log-likelihood test.
The two main steps of FaST-LMM Select are ranking SNPs by linear regression P-values to form the GRM with the top-ranked SNPs and then calculating association statistics in a mixed-model framework, using this GRM.
Thus, in our approach, we select SNPs for by first sorting all available SNPs according to their univariate linear-regression P-values (in increasing order) and then evaluate the use of more and more SNPs in order until we find an optimal number of SNPs (Listgarten et al., 2012).
Only 32 out of the 405 genes annotated with DNA repair processes were differentially regulated with age (Fig. 7A, robust linear regression. P-value < 0.05, R > 0.4).
The test for trend was calculated from the weighted ordinary least squares linear regression with P-value <0.05 regarded as statistically significant.
The log2 transformed fold-change from the host gene and transcript levels from the bacterial genes were positively correlated on a linear regression model (p-value < 0.05).
Red line indicates best-fit linear regression model; p-value and R are shown in C. (C ) Correlation of hydrogen bonding and packing efficiency with binding energy for individual protein genotypes.
Because, in the multiple linear regression, the " p-value" for the slope of ionic strength = 0 is less than 0.01, a correlation between ionic strength and D Sr values does exist, although the contribution of ionic strength to variation in D Sr values is minor.
When the 49 757 pairs of IS elements from the 100 ISs were tested together, an average change in uncorrected p-distance of -0.48 percentage units per Mbp of distance was found using linear regression, with a p-value of 2.35e-25.
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