Exact(3)
When added to the network analysis, intra-individual variants did not alter the initial network structure (data not shown) and lineage groupings 1 3 remained significant (p<0.001).
Besser et al. [ 9] found greater diversity within O157 H7 strains isolated from cattle than those from human clinical illness, but the relationship between their typing scheme and lineage groupings was not explored.
The lineage groupings were supported by the results of both an UPGMA (similarities between any two lineages <50%), and a bootstrap analysis, in which the bootstrap values based on data from four representatives per lineage ranged from 95too 100 (Fig. 3).
Similar(57)
Among chelicerate lineages, some groupings have been recovered rather consistently in phylogenetic analyses, but many relationships have not been firmly established.
Some of these ornaments were used to distinguish bands or lineages and other groupings, but they were not used as status symbols.
Our results showed that spoligotyping was unable to retrieve five out of the seven main strain lineages as monophyletic groupings (Figure 3B).
Relatively few of these hyperinvasive lineages or clonal groupings are responsible for most meningococcal disease worldwide (17 ).
palpalis have overlapping morphology and are made up of several distinct COI lineages whose major groupings are congruent with the ITS1 diagnostic developed to separate these cryptic species [ 12].
As discussed below, fast-evolving genes can lead to spurious groupings where lineages are grouped based on convergent similarity rather than sharing common ancestry.
Our analysis and discussion of regional lineages therefore focuses on groupings with high statistical support and/or lineages that were specifically defined in previous studies.
Analysis of results from multilocus enzyme electrophoresis (MLEE [2]) and multilocus sequence typing (MLST [3]) have demonstrated the existence of distinct phylogenetic groupings (termed lineages, or clonal complexes), a small number of which are consistently more likely to be isolated from patients than are others [4].
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