For overlap alignment, we compared OPTIMA-Overlap with an overlap-finding extension of Gentig v.2 (implemented in the commercial software Genome-Builder from OpGen, which contains a module called SCAFFOLDEXTENDER) [ 17, 24], as well as with Valouev's likelihood-overlap method [ 13].
To write any kind of page-turner is to run up against the likelihood of overlap with King's work: there are only so many dramatic scenarios to which he has not turned his imagination over the course of 40 years.
As shown in Figure 5, we found that as the confidence scores increase, there is increasing likelihood of overlap with the test data.
Lowering its value would increase contig assembly stringency, and therefore, increase the likelihood that overlapping BAC clones are truly overlapping.
With the likelihood of overlapping trials, they are anxious about the cost of security and disruption to other court business.
This increases the likelihood of overlapping regions occurring in test and control sets.
This skewed size distribution has an adverse effect on physical map construction, because it will increase the likelihood of overlaps between unrelated AFLP fragments [ 35].
Part of this challenge could be addressed by generating reads with a greater likelihood of overlapping homoeo-SNPs, i.e., longer reads.
To determine the likelihood of overlapping modules, genes were randomly selected using the criteria specified in Table 3 and an empirical p-value was calculated after 10 million trials to accurately model the likelihood of these results occurring by chance.
For instance, large numbers of distinct variants in the pool increase the likelihood of overlapping, indistinguishable peaks, or variation in the gel matrix between runs confounds the comparison of samples that have been run at different times.
