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The likelihood of alternative hypotheses will also increase, but because they do not fit the data well, their imputation benefit is not that strong.
The modeling framework presented here is designed to evaluate the likelihood of alternative processes of perception, memory and decision making, based on readily available positional data and environmental metrics.
The increase in the likelihood of alternative hypotheses in the MDT system under noisy conditions also causes the MC MDT system with GD to run about 2.5 times slower than under clean conditions (row 3 of Table 4 versus row 3 of Table 5).
However, SNAP does consider the composition of each sequence element in computing the likelihood of particular gene models, and sequence changes within these elements may affect the likelihood of alternative gene models or states (e.g. no gene) enough to alter SNAP's predictions.
BMS evaluates the relative log-evidence (or log-marginal likelihood) of alternative models.
Unfreezing habits requires unlinking cues that prompt and reinforce habitual behavior, thus increasing the likelihood of alternative responses [ 62].
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Log-likelihoods of alternative topologies were compared using CONSEL [ 85] using the eight different statistical tests implemented in this program.
Accordingly, we evaluated the likelihoods of alternative hypotheses among four major characiphysan lineages (Gymnotiformes, Citharinoidei, Characoidei, Siluriformes) using the AU test (Table 5).
A second reason for focusing on maximum likelihood methods is that the likelihoods of alternative pedigrees can serve as input into a second analysis, in which other, non genetic data is included [ 22, 23].
To further test this hypothesis, we computed likelihoods of alternative, non-ML tree topologies supporting the ancient origin of pax6a-linked (pax6.3) genes at the base of vertebrate evolution.
The results of the Shimodaira-Hasegawa test which analyzed the log likelihood scores of alternative tree topologies (with each NA OPXV constrained into the Old World OPXV clade) indicate that the original tree, with a monophyletic NA OPXV, has a significantly (P<.05) better topology.
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