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Searches were made against the Arabidopsis protein database (TAIR10 27416103, 27416 sequences; ftp://ftp.arabidopsis.org/home/tair/Sequences/blast_datasets/TAIR10_blastsets/ TAIR10 pep 20110103 representative gene model) concatenated with a decoy database containing the reversed sequences of the original database.
Thus, the projected databases contain only suffixes of the data-sequences from the original database, grouped by prefixes.
For 2147 (57.9%) a satisfactory match was found in the original database.
Discrepancies were due primarily to inconsistencies in the original database.
The coarse database essentially represents only the unique data from the original database.
A decoy database was generated by reversing the sequences of the original database.
Don't perform repair operation on the original database file.
The original database was constructed at GISS with contributions from IPCC AR4 WGII Chapter 1 Authors.
The original database covers 128 country-surveys.
We used only the original database (database 3) in this evaluation for both approaches.
RW managed the original database.
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