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Library metrics.
sRNA-seq library metrics are in Figure 4 source data 1.
Information on mRNA-seq library metrics is in Figure 1 source data 1 and allele-specific expression information for all genes in endosperm and embryo is in Figure 1 source data 2 and Figure 1 source data 3, respectively.
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We observed that LIBOCAS outperforms the previous SVM library for both metrics.
Standardization of modernization metamodels, with related architecture-driven modernization patterns and metrics libraries provides vendors, service providers, and the enterprises deploying modernization solutions with a clear roadmap for delivering projects.
Based on these metrics, libraries were diluted to 650 pM to 2 nM in 10 mM Tris with 0.5% Tween.
Due to differences in sequencing, depths, normalization,and library preparation procedures, assembly metrics varied among libraries (Table 7).
QuaMeter software is a tool built on the ProteoWizard library to produce quality metrics from LC-MS/MS data.
We mapped all reads with uniform settings (see Materials and Methods for details) and examined library and ChIP QC metrics for each dataset.
Sequencing metrics revealed library insert sizes of 250-300 bp for C. difficile, E. coli and M. Tuberculosis, irrespective of the original TapeStation profile.
To reduce sampling bias due to differences in library sizes and assembly metrics, a custom python script was used to subsample (with replacement) level four GO assignments from 675 reads and isotigs from each library.
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