Source code was written in C++, with no external libraries needed for compilation.
Compilation... compilers?
This was done primarily by utilizing authors' libraries, previous literature compilations (Baden and Boström, 2001; Boström et al., 2003) and ISI Web of Knowledge (keywords; Zostera marina, Baltic Sea, Sweden, Denmark, Norway, Finland, Estonia, Germany, Poland).
A further complication is the large variety of NMR experiments and observables an automated workflow might need to accommodate, which necessitates the compilation of a library of experiment-specific simulation programs.
Here, we describe the LNCaP atlas, a compilation of LongSAGE libraries that catalogue the transcriptome of human prostate cancer cells as they progress to CRPC in vivo.
Recent releases have included a compilation of ultra-rare library music from artists such as Delia Derbyshire and Brian Eno, as well as more contemporary, wonky acid from Bristol's Bass Clef.
Also, Vivid will resell Sunny in compilation DVDs as her library of performances builds.
After initial compilation of the backend library KMCLib is used as a Python module; input to the program is given as a Python script executed using a standard Python interpreter.
So far, the compilation of the reference libraries used for masking relies on the ability of a few experts to mine individual repeats, reconstruct consensus sequences and classify each TE family.
SAGE and MPSS do not require any pre-compilation of an mRNA library of sequences, but instead, they use type IIS restriction endonucleases, i.e. tagging enzymes, to collect short tags (typically 10 22 bases) from each mRNA molecule, provided a relevant recognition site exists for an anchoring enzyme.
