The density of interspersed repeats is less than 9% in chicken genome, which is much lower than that in mammalian genomes [22].
Over one third of the bovine Type I IFN locus consists of interspersed repeats, rather less than the 43% assessed for the murine Type I IFN locus [ 27].
In the hills, the stream gradient (slope) generally ranges from 15 to 30 percent interspersed with sections of less than 15 percent along the middle reaches.
Long DNA molecules of several hundred Kb can comfortably span most types of proximal or interspersed repeats so that they become less problematic for optical mapping.
In contrast, promoter regions with the lowest Kappa Index of Coincidence values (ie. chromosomes Y,X,12,8), contain more interspersed nucleotides (A,T,C,G ≈ 25%) and less SSRs and STRs structures.
As a further validation, we interrogated our former sc6ab 380 Mb assembly for the same interspersed repeat elements, with the expectation of recovering less repeats.
There's also an entertaining London Party Mode, that has you chasing characters around overhead 2D (or less convincing 3D) London streets to complete a sticker book, with interspersed sports events triggered by the chimes of Big Ben.
Expression of proteins in the interspersed PIN and benign tissue and the normal prostate control core was heterogeneous and less intense than the neoplastic tissue.
For instance, 54% of the intronic regions for the MSH2 gene comprise interspersed repeats, where 33% of this sequence is Alu repeats (MLH1: 53% interspersed repeats with 20% Alu; MSH6: 48% interspersed repeats with 42% Alu; PMS2: 57% interspersed repeats with 45% Alu).
The overall interspersed repeat, i.e. transposable element (TE), content of the chicken genome was determined to be less than 9% [ 1].
