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The model is developed with five parameters consisting the channel length, upstream and downstream water depths, time, and the distance factors as the input data, while the water depths and flow velocities are considered as the outputs.
Growing up to 5 feet in length upstream, the eels return to the ocean via the Hudson River to spawn.
Passing south of several residential areas on the foothills to the north, Aliso Creek and El Toro Road run parallel for much of the creek's length upstream from Interstate 5. Flowing southwest in a small ravine along the right side of the road, the creek soon passes underneath the twin bridges of California State Route 241, and receives from the right an unnamed northern fork.
From further detailed analysis of sequences around the prophage insertion site and between the terminal repeat-like sequence and cas genes, we found a portion of a terminal repeat sequence (14 bp in length) upstream of the prophage (Fig. 4A).
Here, expression of the downstream ORF by termination-reinitiation requires a stretch of mRNA (between 69 and 87 nt in length) upstream of the stop codon of the first ORF (termed the termination upstream ribosome binding site or TURBS) and the close proximity of the stop and start codons of the two ORFs [15], [17], [19].
Each set was sampled from a region spanning a different length upstream of the TSS.
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The Length of upstream segment parameter allows users to choose how many base pairs upstream of the TSS are used for the analysis (0 bp to 10,000 bp).
In exponentially growing cultures, the GUS gene was not expressed if the length of upstream sequence was less than 400 bp, and >1100 bp were required for maximum expression.
The length of 5' (upstream) UTRs of the APMV-5 N, P, M, F, HN and L genes are 67, 55, 123, 165, 112 and 67, nt, respectively (Figure 1).
The default length of upstream sequences was set at 1000 bases.
Let S be the set of N sequences of length L upstream to TISs.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com