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Indeed, we often find SARs extending over the entire length of expressed genes such as RNA Pol III polypeptide K, eukaryotic translation elongation factor 1 alpha, and subunit 3 of NADH dehydrogenase (ubiquinone) 1 alpha.
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'Partial DIA1 orthologues' are those where the full-length gene or cDNA sequence is currently incomplete (partial), due to gaps in genomic sequence or because of the limited read-length of expressed sequence tag (EST) sequencing data.
Secondly, retaining full length coverage of expressed RNAs in ultra-low input preparations is especially challenging.
Obtaining full length coverage of expressed genes is vital for the identification of isoforms and splice variants.
Consequently, genome-scale collections of the full-length cDNAs of expressed genes become important for the analysis of the structure and function of genes [ 11].
Measures of intervention exposure: Women in the intervention group will keep a diary of antenatal expressing, noting: date and time of day each expressing episode takes place, length of each expressing episode and volume of colostrum expressed.
Vinogradov proposed the "genomic design" hypothesis, which postulates that the shorter length of highly expressed genes is better explained by the fact that these genes also tend to be broadly expressed across numerous tissues and thus have simpler regulation, and require fewer regulatory sequence elements, than genes expressed in a more narrow tissue-specific fashion.
To increase the protein solubility, and avoid expression in E. coli inclusion bodies, we extended the length of the expressed NBD domains, to include proximal domains.
Thus, the reduction in sequence length of highly expressed genes is more likely to be compatible with the hypothesis that higher efficiency is required for the expression of highly expressed genes.
The optimisation of the length of the expressed proteins, based upon the boundary prediction of NBDs and neighbour domains, enables the expression and purification of soluble ABCA1 NBDs, with high ATPase activity.
The effects we observed here primarily impact the length of differentially expressed gene lists, and these are exacerbated by the application of FDR correction [13].
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