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For wildcards, this consists of single wildcard equivalency "01.W", where W is the maximum wildcard length allowed; e.g. for the default maximum wildcard length of 2, the wildcard equivalencies are 0, 1 and 2, and a variable length gap of 1 or 2 is represented by the equivalency [12].
The set S/ P stands for all the substrings of S that match pattern P. The notation x(n, m), 0 ≤ n < m, is used for a wildcard region with minimum length gap of n and maximum length gap of m, and x(n) stands for a rigid-length n gap.
Similar(58)
When he waxes serious, as "Ma" seemed to do at great length, the gap of understanding is harder to bridge.
Bio.SeqIO interprets multiple sequence alignment file formats as collections of equal length (gapped) sequences.
Cumulative gap length: sum of gap lengths of all transcripts.
If A is an admissible subcategory of D b (X ), then the length of any gap of A is at most the maximal length of any gap of D b (X ).
This is presumably a consequence of a decline in the length of gap relative to the length of contig and scaffolds as more scaffolds are joined.
The maximal length of gap size between palindromic repeats was restricted to 3 kb.
If the two sequences are of different lengths, gaps are inserted to make them of equal length.
Patients were categorized by the number of gaps in therapy and the cumulative length of gaps.
This alignment only requires a gap of length two.
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CEO of Professional Science Editing for Scientists @ prosciediting.com