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Failure rates ranged from 3.6% to 8.9% leaving data from 9126 white ethnic children available for analysis (82.8% of these having data on all 4 SNPs).
Of these, 239 subjects were excluded because of missing demographic data (n = 161) or having insufficient serum sample (n = 78), leaving data from 50,111 (99.5%) subjects for analysis, Demographic characteristics of the entire sample are shown in Table 2.
In 15 cases no GSW-related BOLD changes were found in the thalamus (14 cases) and in the precuneus (one case), leaving data from 7 patients (5 females) in whom significant GSW-related BOLD signal changes (increase and/or decrease) were revealed in all three regions of interest: the thalamus, vmPFC (Brodmann Area 10) and precuneus (Brodmann Area 7).
Three arrays were excluded due to poor quality leaving data from 79 healthy women and 64 breast cancer patients.
The multivariate model had 33 cases with missing values, leaving data from 243 persons for the multivariate model.
This corresponded to a total of 985 genes, leaving data from 3,141 genes that were merged into a supermatrix.
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These exclusions left data from 27 participants for analysis.
This left data from 178 participants for analysis.
However, this leaves data from five stimuli and from unstimulated cells that can be used for calculating correlation coefficients.
This left data from 253 participants for analysis (i.e., 94 participants were excluded – 27% of the initial dataset).
The left data from original data are called the "out-of-bag" (OOB).
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com