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Leaf transcript levels for TC54504 (Fig. 5B) revealed no change in mRNA abundance between treatment and control.
In this study, leaf transcript of miR3446 was decreased by B-deficiency and its target gene (MAPKKK5) was up-regulated under B-deficiency.
Mapping leaf transcript 454 reads from the doubled haploid line 'CUDH2150' to A. cepa LFS cDNA sequences (GenBank accession nos. AB094593 and AB089203) with stringent criteria revealed 119 matching reads containing three variants at intermediate frequencies (Table 2).
For instance, compared to the levels in WT leaves infested by S. littoralis, the leaf transcript levels of Thi2.1 were higher in cpk13 after 24 h but lower after 6 h.
Whole genome leaf transcript profiling was performed using the maize 46 K arrays obtained from the maize oligonucleotide array project (http://www.maizegdb.org/microarray.php mes) essentially as described previously in [ 18].
To determine whether stress-responsive changes observed in cabinet-grown plants are recapitulated in the field, we analyzed leaf transcript and metabolic profiles of Thellungiella growing in its native Yukon habitat during two years of contrasting meteorological conditions.
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Transcription factor binding sites, which were overrepresented in our DEGs, correlated with this pattern as well, with six hour leaves containing the highest number of unique transcription factor binding sites, and binding sites within six hour leaf transcripts greater than six hour root transcripts.
SSRs in leaf transcripts.
KEGG pathways represented by leaf transcripts.
Annotation of leaf transcripts to the Uniprot database.
Gene ontology classification of root and leaf transcripts.
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