Sentence examples for ld of each from inspiring English sources

The LD of each pair of SNPs was calculated using TASSEL 4 [ 50].

We then indexed all variants in strong LD of each dSNP using an R2 ≥ 0.80 threshold.

After imputation LD of each marker with the previous one in the assembly was inspected.

While the panel above illustrates the LD of each SNP with the top associated SNP pointing out that the two phenotype association signals are only partially overlapping.

The high levels of LD for each of the 18 marker pairs were not present in all 14 pig breeds, indicating that though a given marker pair may contain redundant information for one breed that is not necessarily the case for all breeds.

Then, for each patient, the CDR3-LD of each V β family was compared across the different compartments using CDR3 spectratyping method and/or high-throughput sequencing (see Material and Methods section).

Each mono/oligoclonal CDR3-LD was compared to the same V β family CDR3-LD of each lesion of the same patient, using the similarity score described in Method section (score 0/1 for different CDR3-LD, 2/3 for similar CDR3-LD) (Fig. 1B).

A global test of LD for each pair of loci was performed across populations using Fisher's method.

To evaluate overall consistency of LD among ponds, we used partial Mantel tests [ 69] to evaluate the correlation between the matrices of LD for each pair of ponds with recombinational distance between markers as the covariate.

To avoid inflating the effects of some loci that were overrepresented by many SNPs in strong linkage disequilibrium (LD), one of each pair of SNPs that were in LD (r > 0.8) were randomly removed.

The Linkage Disequilibrium (LD) maps of each chromosomal region harboring the most significant SNPs were created using a window size of±200 Kb.