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Importantly, we demonstrate that IPF myofibroblasts manifest a much greater dependence on collagen matrix conditions than do their control counterparts, changing the translational activity of a large set of transcripts.
A. variegatum also has a large set of transcripts coding for cement-like proteins unique to metastriate ticks.
In both Drosophila embryos and the larval central nervous system (CNS), a large set of transcripts are extended beyond the predicted end of the 3′ UTR.
Expression analysis revealed a large set of transcripts differentially expressed between ovary and testis of the bluehead wrasse (fold change ≥2 and BH adjusted p value ≤0.05).
These trans-regulatory bands were also visible at more stringent threshold levels, and this strengthens the notion of a role of these loci in the variation of expression of a large set of transcripts.
The large set of transcripts assembled in this study is the most comprehensive set of genome resources ever developed from catfish, which will provide the much needed resources for functional genome research in catfish, serving as a reference transcriptome for genome annotation, analysis of gene duplication, gene family structures, and digital gene expression analysis.
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A large set of transcript sequences for pear was obtained to identify the majority of activated genes involved in this process.
Additionally, the observed changes in a large set of transcript expression levels are indicative of a complex response to the varied petroleum components to which the fish were exposed.
Several such tools are available for algae, including the Algal Functional Annotation Tool, which allows visualization of sets of transcripts on pathway maps and provides for statistically rigorous functional analysis of large sets of transcripts [ 28].
There were large sets of transcripts within the genome that were concomitantly responsive to several agents, e.g. diamide and H2O2 and menadione (20.2 %); H2O2 and menadione (11.9 %); diamide and H2O2 (3.7 %), and diamide and menadione (17.0 %).
We ran both MITIE and Cufflinks, given only this one annotated transcript and the RNA-Seq reads from a larger set of transcripts to predict transcripts.
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