Sentence examples for knowledge based prediction from inspiring English sources

Another pathway prediction system, PathPred (http://www.genome.jp/tools/pathpred/), is a knowledge based prediction system that uses data derived from the Kyoto Encyclopedia of Genes and Genomes (KEGG) in the form of the KEGG REACTION database and KEGG repair database [ 18].

In order to extend our knowledge base, predictions are not limited to small molecules as in Alaimo et al. [ 19] rather extended to biotech drugs using an appropriate similarity measure based on their synthetic amino-acidic sequence, if available.

To our knowledge, kinetic model based predictions, and particularly experimental data of the profile of metabolite concentrations and flux levels, are not available for genome-scale models.

Context based prediction.

Polynomial model based prediction method.

Trigonometric function model based prediction method.

Knowledge based computational techniques for function prediction rely on functional classification schemes [ 12] such as Functional Catalogue (FunCat) [ 13], Clusters of Orthologous Groups (COGs) [ 14], and Gene Ontology (GO) [ 15], among which GO is the most commonly used annotation system.

However, most available tools for nucleosome occupancy predictions are knowledge based, fail to account for epigenetic marks and perform poorly on DNA sequences with unknown nucleosome occupancy characteristics.

Biochemically-based pathway prediction systems work on knowledge based biotransformation rules.

We found that the opportunity for success in prediction of clinical outcomes in GBM was increased when the prediction was based on the integration of genomic data and genomic knowledge based on inter-relationship.

The computational approaches for in silico prediction can be roughly categorized into genome based approaches, network topology based approaches, literature knowledge based methods, and structure based approaches [ 11].