Sentence examples for kingdom origin from inspiring English sources

Additionally, we investigated Kingdom origin through the best BLAST hit for each sequence (Table 4).

For 6 of the 10 sequences, CVA{ all} and BLAST agreed with Kingdom origin.

Thus, in addition to accurately discerning Kingdom origin, we linked highly discriminating sites to those with known molecular functions.

Other classification methods, such as phylogeny or BLAST based methods, may accurately classify sequences to correct Kingdom origin as we report here (Table 2).

The performance of classification models was determined by comparing predicted Kingdom origin to the actual origin in the 7692 test sequence set [ 20].

CVA{ all} provided further evidence of correct Kingdom origin for all the sequences from Arabidopsis thaliana and 3 from Homo sapiens.

Briefly, the top four BLAST matches (E-value<1e-10) of GOS ORFs to NCBI nr were considered, the kingdom of origin for each match was determined and the kingdom votes for each scaffold were subsequently pooled.

The predicted Kingdom of origin is also reported.

Thus using only sites 8 and 9 (basic); 19 (Helix 1); 50 and 56 (Helix 2) the decision tree was able to discern Kingdom of origin for bHLH sequences with an accuracy over 92%.

Although the Mahalanobis distance between Plants, Animals, and Fungi were smaller in pah, pss, ms, cc, and ec, the sequences clearly clustered among their Kingdom of origin in each separate analysis.

In contrast to the approach taken by DAS of leveraging conserved gene families across bacteria, fungi, protists or viruses, shotgun metagenomics can potentially catalogue all of the microbes present in a sample, irrespective of their kingdom of origin, by sequencing all the nucleic acid extracted from a specimen.