Sentence examples for junction descriptions from inspiring English sources

Therefore, we compared the breseq predictions to our input structural variants at the level of junction sequences rather than junction descriptions.

Because breseq uses read mapping options that report all alignments to sequence repeats in the reference genome, pairs of alignments for the same read that match different reference locations may yield equivalent junction sequences but different junction descriptions.

While processing all reads with suitable split mappings to the reference sequence in this manner, the lists of predicted junctions with the exact same junction sequence and junction description parameters are merged into a running list of possibilities.

The same junction sequence can potentially be described in many different yet equivalent ways using our junction description scheme: the breakpoint coordinates can be shifted when there is overlap between the two read matches, or different coordinates and strands can be used to describe a side of a junction that matches a repeated sequence in the reference genome.

In summary, any junction candidate sequence can be fully specified by six junction description parameters: two reference positions, two orientations with respect to the reference sequence, the number of overlap bases, and the identities of any inserted bases that are in the read and not in the reference.

Anatomic location was classified following image or pathology descriptions, as cardia (defined as cardioesophageal junction, oesophagogastric junction and gastroesophageal junction) (Sobin and Wittekind, 2002) or non-cardia (all other specified sites).

These transfer functions are then used to derive a pseudostate space description in which the junction temperature and the dissipator temperature are pseudostate variables.

This model constitutes a step forward towards a structurally detailed description of the gap junction architecture and provides a structural platform to plan new biochemical and biophysical experiments aimed at elucidating the structure of connexin channels and hemichannels.

The first, second and last column indicate the gene symbol, the RefSeq ID and the description of each Tight junction gene respectively.

A man fitting a similar description was seen standing at the junction of Welsh Street and McAuley Street at around 8.40am.

A consistent analytical framework is constructed within which descriptions of various member types and junctions can be accommodated.